miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|198052329|gb|FL779773.1|FL779773 GAAATGATCCTTCTGTAAATTTAGTAGTGACTTGGTTCAACAAGACAACCTGCTCAATAAAATAAGATGATAAGTATGAT
AGGTTGATAGCCTCATTTAATCCTTCCTCCCTCCGTTCCAAATTATGGGTTGTTTTAGCTTTGTCCAAGTCAAACATGTC
TAAATTTGACTAAGTTTATAGAAAAATATATTAACATCTATAATATCAAATATAGTGCACTTTGAAAATATATTTCATGG
TCTATCTACTGAAACTAATTTGATATCGAAGATATTTATGCATTTTTCTATAAACTTGGTCAAAGCTAAAGAAGTTTGAC
TTAGGGCAAAGCTAAAACGAGTTATGTTTTGGGATGGAGGGAGTACTGAAAATCTGTACAAAATATGTTTTTTGGAAAAA
AGAAACATGACGGTAGTTGCTGCATCACAAGTGCACGCCCTTCATAAACATGATAGGCAAATTACCACCAAGTTGTATGT
CTTTGCAATCTTCATTAACTTCAATGACAATCCACTAAGCACTCTGGTCCGCAGAGCCATATCATCAAAATCTTGTCGAA
AGTGGAAAGTGACACTATCAATAATAACTATACGCACATCTTTATGCTCCCCGAGGAATTTTTCCAGGTAGTTTATAGCA
GCAGTCTGTTCTGTATAGCTGCATATTCGGAAGTAAAAGATGTCTGCAAGGAAATGCTCAGCTGCAGCTGTTTTTGGGCC
AGAAGAGACTTCTCATGGCTGTGCGAAAGTGCTCCAGTATGTCGC




Most similar to sp|Q8GXF0|RA51C_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3
           OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2
          Length = 363

 Score =  118 bits (295), Expect = 5e-26
 Identities = 52/83 (62%), Positives = 71/83 (85%)
 Frame = -1

Query: 699 EHFLADIFYFRICSYTEQTAAINYLEKFLGEHKDVRIVIIDSVTFHFRQDFDDMALRTRV 520
           E  L +IFYFR+CSYTEQ A +N+LEKF+ E+KDV++VI+DS+TFHFRQD+DD+A RTRV
Sbjct: 206 EDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLAQRTRV 265

Query: 519 LSGLSLKLMKIAKTYNLVVICLS 451
           LS ++LK MK+AK ++L V+ L+
Sbjct: 266 LSEMALKFMKLAKKFSLAVVLLN 288